PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00389.1.g00020.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 614aa    MW: 65608.3 Da    PI: 9.0706
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00389.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-30365423259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                    Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Zpz_sc00389.1.g00020.1.am.mk 365 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAnGCPVRKQVQRCAEDRSILITTYEGTHNHP 423
                                   7***************************999***************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.9E-34349425IPR003657WRKY domain
SuperFamilySSF1182906.93E-28357425IPR003657WRKY domain
PROSITE profilePS5081129.551359425IPR003657WRKY domain
SMARTSM007748.3E-37364424IPR003657WRKY domain
PfamPF031062.8E-27366423IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0016036Biological Processcellular response to phosphate starvation
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0080169Biological Processcellular response to boron-containing substance deprivation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    Send to blast
MGIRKWGGRK KALADQVKGV DVVVVSLSLS LSLSLSPRAR KWGSFVEDGT PRLRTWENSS  60
SFPGLSRKKK YAHGVDRSMA WKLHPIQSII RQVVVFVYPD HCMDKGPGGG GGLLALDASP  120
RALGFRNPLG PPFHSTMDAD DAAVPHQHQH GRRTSVEVDF FSDDKKKTGE PERTTKKEAA  180
DTCLQLLPAG NNNNEDDGST ELAAMRSELG RMNDENQRLR GMVTQVTTSY QALQMHLVTL  240
TQQRAGQTQP PPATTTQQLQ HHQQQDGIMP RPFLDLVPRS SGGDGAEELS NSSTEAGSPR  300
RSSSTGNNKL GERGESPSKV GWLPEGRQQQ DKVHHEQEQQ QQAQEATMRK ARVSVRARSE  360
APIIADGCQW RKYGQKMAKG NPCPRAYYRC TMANGCPVRK QVQRCAEDRS ILITTYEGTH  420
NHPLPPAAMA MASTTTAAAS MLLSGSMPSA DGGVASNFLA RTVLPCSSSM ATISASAPFP  480
TVTLDLTNGP PNATTACPPQ FQMPLPGGGA APAFTVPPHV LYNQSRFSGL QMSSPSSGAH  540
VDPASRDDPS SLADTVSAAA AAITADPNFT VALAAAITSI IGGGAAAGNN NYNNNATTTR  600
SNNTTSNNTN SETH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21351427176WRKY transcription factor 1
2lex_A1e-21355425877Probable WRKY transcription factor 4
1wj2_A1e-21355425877Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00209DAPTransfer from AT1G62300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015622142.10.0PREDICTED: probable WRKY transcription factor 31 isoform X2
SwissprotQ9C5191e-115WRKY6_ARATH; WRKY transcription factor 6
TrEMBLA0A0E0BZX30.0A0A0E0BZX3_9ORYZ; Uncharacterized protein
STRINGBGIOSGA003134-PA0.0(Oryza sativa Indica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-89WRKY family protein